Applied and Environmental Microbiology, November 2001, p. 4945-4954, Vol. 67, No. 11
Department of Fisheries, Kinki University,
Nara 631-8505,1 and Ocean Research
Institute, University of Tokyo, Nakano-ku, Tokyo
164-8639,5 Japan, and School of
Microbiology & Immunology, The University of New South Wales,
Sydney, UNSW 2052,2 and School of
Agricultural Science3 and Antarctic
CRC,4 University of Tasmania, Hobart 7001, TAS, Australia
Received 30 May 2001/Accepted 7 August 2001
Numerous studies have established the importance of picoplankton
(microorganisms of
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.11.4945-4954.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Sphingomonas alaskensis Strain AFO1, an Abundant
Oligotrophic Ultramicrobacterium from the North Pacific
2 µm in length) in energy flow and nutrient cycling in marine oligotrophic environments, and significant effort has
been directed at identifying and isolating heterotrophic picoplankton from the world's oceans. Using a method of diluting natural seawater to extinction followed by monthly subculturing for 12 months, a
bacterium was isolated that was able to form colonies on solid medium.
The strain was isolated from a 105 dilution of seawater
where the standing bacterial count was 3.1 × 105
cells ml
1. This indicated that the isolate was
representative of the most abundant bacteria at the sampling site, 1.5 km from Cape Muroto, Japan. The bacterium was characterized and found
to be ultramicrosized (less than 0.1 µm3), and the size
varied to only a small degree when the cells were starved or grown in
rich media. A detailed molecular (16S rRNA sequence, DNA-DNA
hybridization, G+C mol%, genome size), chemotaxonomic (lipid analysis,
morphology), and physiological (resistance to hydrogen peroxide, heat,
and ethanol) characterization of the bacterium revealed that it was a
strain of Sphingomonas alaskensis. The type strain, RB2256,
was previously isolated from Resurrection Bay, Alaska, and similar
isolates have been obtained from the North Sea. The isolation of this
species over an extended period, its high abundance at the time of
sampling, and its geographical distribution indicate that it has the
capacity to proliferate in ocean waters and is therefore likely to be
an important contributor in terms of biomass and nutrient cycling in
marine environments.
*
Corresponding author. Mailing address: School of
Microbiology and Immunology, The University of New South Wales, Sydney,
UNSW 2052, Australia. Phone: 61-2-9385-3516. Fax: 61-2-9385-2742. E-mail: r.cavicchioli{at}unsw.edu.au.
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