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Applied and Environmental Microbiology, November 2000, p. 4954-4961, Vol. 66, No. 11
Molecular Infectious Diseases Group,
Department of Paediatrics, Institute of Molecular Medicine, John
Radcliffe Hospital, Oxford OX3 9DS, United
Kingdom,1 and Institute of Medical
Microbiology and Immunology, University of Copenhagen,
Copenhagen,2 and Danish Pest Infestation
Laboratory, Lyngby,3 Denmark
Received 29 November 1999/Accepted 10 August 2000
The rat model of Pneumocystis carinii pneumonia is
frequently used to study human P. carinii infection, but
there are many differences between the rat and human infections. We
studied naturally acquired P. carinii in wild rats to
examine the relevance of the rat model for human infection. P. carinii DNA was detected in 47 of 51 wild rats and in 10 of 12 nonimmunosuppressed laboratory rats. Evidence for three novel formae
speciales of rat-derived P. carinii was found, and these
were provisionally named Pneumocystis carinii f. sp.
rattus-secundi, Pneumocystis carinii f. sp.
rattus-tertii, and Pneumocystis carinii f. sp.
rattus-quarti. Our data suggest that low-level carriage of
P. carinii in wild rats and nonimmunosuppressed laboratory
rats is common and that wild rats are frequently coinfected with more
than one forma specialis of P. carinii. We also examined the diversity in the internally transcribed spacer (ITS) regions of the
nuclear rRNA operon of Pneumocystis carinii f. sp.
carinii by using samples from wild rats and laboratory rats
and spore trap samples. We report a lack of variation in the ITS1 and
ITS2 regions that is consistent with an evolutionary bottleneck in the
P. carinii f. sp. carinii population. This
study shows that human- and rat-derived P. carinii
organisms are very different, not only in genetic composition but also
in population structure and natural history.
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Population Structure of Rat-Derived
Pneumocystis carinii in Danish Wild Rats
*
Corresponding author. Mailing address: Molecular
Infectious Diseases Group, Department of Paediatrics, Institute of
Molecular Medicine, John Radcliffe Hospital, Oxford OX3 9DS, United
Kingdom. Phone: 44-1865-222344. Fax: 44-1865-222626. E-mail:
wakefield{at}molbiol.ox.ac.uk.
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